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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
34
muscle of arm
31
muscle of leg
19
tibial nerve
16
tibial artery
11
testis
10
gastrocnemius medialis
5
GM23248
5
NT2-D1 cell
5
gastrocnemius medialis(Muscle - Skeletal)
5
limb
4
lower leg skin
2
hindlimb muscle
2
muscle of leg
2
arm bone
2
femur
2
leg bone
2
skin of forearm
1
Leydig cell
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
fibroblast of arm
1
forelimb muscle
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - sun exposed (lower leg)
Organ
5
connective tissue
5
limb
5
skin of body
0
testis
Life stage
2
adult
Date released
2
February, 2021
2
September, 2022
1
June, 2020
Software used
3
macs
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
candidate regulatory elements
Showing 5 of 5 results
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Download
FileSet
DSR448QKS
released
Annotation file set
: Target gene predictions for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR689DCS
released
Annotation file set
: Chromatin states for BSS00476 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR263KHK
released
Annotation file set
: Histone modifications annotation for Epidermis Dermal_fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337EJT
released
Annotation file set
: Binding sites annotation for Epidermis Dermal_fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR757SGA
released
Annotation file set
: Accessible chromatin annotation for Epidermis Dermal fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP