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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
chromatin state
1
histone modifications
Annotation Category
5
cis-regulatory elements
2
Target gene links
Annotation type Category
5
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
1
bed bed9
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
7
cell line
Biosample term
41
A549
35
lung
26
left lung
23
right lung
10
fibroblast of lung
9
upper lobe of left lung
7
IMR-90
7
type II pneumocyte
6
PC-9
4
type I pneumocyte
3
NCI-H226 cell
3
NCI-H460 cell
2
WI38
2
lung microvascular endothelial cell
1
endothelial cell of artery
1
lung neuroendocrine cell
Organ
7
lung
Life stage
2
embryonic
Date released
2
February, 2021
2
September, 2022
1
June, 2020
1
May, 2021
1
October, 2022
Software used
3
macs
2
chromhmm
1
abc
1
r
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
annotation_type!
candidate regulatory elements
Showing 7 of 7 results
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FileSet
DSR195QHJ
released
Annotation file set
: Binding sites annotation for IMR-90 (IMR90) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772ORX
released
Annotation file set
: Target gene predictions for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR822GKY
released
Annotation file set
: Chromatin states for BSS00720 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR843YYZ
released
Annotation file set
: Histone modifications annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR268PHG
released
Annotation file set
: Binding sites annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895REE
released
Annotation file set
: enhancer-gene predicton of IMR90-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR879CGQ
released
Annotation file set
: Accessible chromatin annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP