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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
chromatin state
1
histone modifications
Annotation Category
5
cis-regulatory elements
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
39
brain
15
caudate nucleus
13
putamen
13
substantia nigra
12
cerebellum
12
frontal cortex
9
Ammon's horn
9
layer of hippocampus
8
choroid plexus epithelial cell
7
amygdala
7
hypothalamus
7
nucleus accumbens
7
temporal lobe
6
SK-N-DZ
6
SK-N-MC
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
globus pallidus
6
midbrain
5
cardiac fibroblast
5
BE(2)-C
5
SK-N-SH
4
Daoy
4
U-87 MG
4
angular gyrus
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
brain pericyte
4
cingulate gyrus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
medulla oblongata
4
middle frontal gyrus
4
pons
3
A172
3
M059J
3
brain microvascular endothelial cell
3
cerebellar cortex
3
prefrontal cortex
2
Brodmann (1909) area 46
2
H54
2
dorsolateral prefrontal cortex
2
hippocampal neuron
2
inferior parietal cortex
2
medulloblastoma
2
middle frontal area 46
2
pituitary gland
1
brain microvascular endothelial cell
1
BE2C
1
Brodmann (1909) area 9
1
Glioblastoma
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
cardiac fibroblast
1
cerebellar hemisphere
1
claustrum of brain
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
frontal pole
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
Disease term
1
neuroblastoma
Organ
5
brain
Life stage
1
child
Date released
2
February, 2021
1
June, 2020
1
October, 2022
1
September, 2022
Software used
3
macs
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
chromatin state
annotation_category!
Target gene links
Showing 5 of 5 results
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Download
FileSet
DSR032JQH
released
Annotation file set
: Binding sites annotation for BE(2)-C (BE2_C) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384UZS
released
Annotation file set
: Candidate regulatory elements for BSS00102 BE(2)-C from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273HED
released
Annotation file set
: Histone modifications annotation for Neural BEBRACKETL2BRACKETR-C from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR406EPW
released
Annotation file set
: Binding sites annotation for Neural BEBRACKETL2BRACKETR-C from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR420CEV
released
Annotation file set
: Accessible chromatin annotation for Neural BE(2)-C from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP