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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
18
foreskin keratinocyte
18
keratinocyte
17
foreskin fibroblast
10
skin fibroblast
9
fibroblast of dermis
8
dermis blood vessel endothelial cell
8
lower leg skin
6
GM23248
6
dermis lymphatic vessel endothelial cell
5
iPS DF 4.7 Cell Line
5
skin of body
4
RPMI7951
4
SK-MEL-5
4
dermis microvascular lymphatic vessel endothelial cell
4
iPS DF 19.11
3
iPS DF 19.7
3
iPS DF 6.9
3
iPS-11a
3
iPS-15b
3
iPS-18a
3
iPS-18c
3
iPS-20b
3
suprapubic skin
2
COLO829
2
basal cell of epidermis
2
epidermal melanocyte
2
granular cell of epidermis
2
skin of forearm
2
skin of prepuce of penis
1
BJ
1
HGPS cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Disease term
2
melanoma
Organ
4
skin of body
Life stage
3
adult
Date released
2
February, 2021
2
September, 2022
Software used
2
r
1
encode-ccres
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
chromatin state
Showing 4 of 4 results
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Download
FileSet
DSR378UFE
released
Annotation file set
: Candidate regulatory elements for BSS01551 SK-MEL-5 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR453EBO
released
Annotation file set
: Target gene predictions for BSS01551 SK-MEL-5 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR429NUM
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE SK-MEL-5
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR136QJO
released
Annotation file set
: Histone modifications annotation for Epidermis SK-MEL-5 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP