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Schema
Citing CMDGA
Clear Filters
Annotation type
834
histone modifications
826
candidate regulatory elements
711
binding sites
173
gene expression
3
accessible chromatin
eQTL
2
target gene predictions
1
representative DNase hypersensitivity sites
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
2
cell line
1
primary cell
Biosample term
1
HepG2
1
osteoblast
1
smooth muscle cell of the coronary artery
Organ
bone element
8
skeleton
6
limb
1
artery
1
blood vessel
1
connective tissue
1
heart
1
liver
1
vasculature
Life stage
2
adult
1
unknown
Date released
284
June, 2020
221
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
27
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
February, 2021
3
September, 2018
2
November, 2020
1
June, 2021
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
eQTL
organ_slims!
bone element
Showing 3 of 3 results
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FileSet
DSR442EVO
released
Annotation file set
: Accessible chromatin of smooth muscle cell of the coronary artery from GSE113348 ATAC-seq cell lines
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR848MAN
released
Annotation file set
: Accessible chromatin of E-MTAB-7543 - ATAC-seq of HepG2 cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010PUE
released
Annotation file set
: Accessible chromatin of E-MTAB-6834 - ATAC-seq of primary mesenchymal stem cell (MSC)-derived osteoblasts (differentiated with BMP2) from 4 human donors
Lab:
AMP-T2D consortium
Project:
AMP