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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
16
primary cell
1
cell line
1
tissue
Biosample term
90
heart
85
stomach
80
kidney
71
brain
67
lung
67
muscle of arm
62
small intestine
61
adrenal gland
59
placenta
58
muscle of leg
56
large intestine
54
muscle of back
52
left lung
48
thymus
45
right lung
42
liver
42
right kidney
40
renal cortex interstitium
40
renal pelvis
39
retina
36
left kidney
33
heart left ventricle
33
spleen
31
islet of Langerhans
30
spinal cord
28
adipose tissue
23
body of pancreas
23
sigmoid colon
23
tibial nerve
21
pancreas
20
caudate nucleus
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
coronary artery
19
heart right ventricle
18
gastrocnemius medialis
18
thyroid gland
18
transverse colon
17
muscle of trunk
17
right atrium auricular region
17
testis
17
tibial artery
16
chorionic villus
16
omental fat pad
16
upper lobe of left lung
15
ascending aorta
15
endocrine pancreas
15
layer of hippocampus
15
subcutaneous adipose tissue
15
substantia nigra
14
Peyer's patch
14
cerebellum
14
frontal cortex
14
skeletal muscle tissue
14
temporal lobe
13
aorta
13
prostate gland
12
left cardiac atrium
12
left renal cortex interstitium
12
left renal pelvis
12
putamen
12
right renal pelvis
11
Ammon's horn
11
breast epithelium
11
esophagus squamous epithelium
11
right renal cortex interstitium
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
esophagus muscularis mucosa
10
lower leg skin
9
cingulate gyrus
9
duodenal mucosa
9
esophagus
9
eye
9
mucosa of rectum
9
parathyroid adenoma
9
stomach smooth muscle
9
tongue
9
vagina
8
globus pallidus
8
limb
8
midbrain
8
muscle layer of colon
8
muscle layer of duodenum
8
occipital lobe
8
right cardiac atrium
8
right lobe of liver
8
urinary bladder
8
uterus
7
gastroesophageal sphincter
7
superior temporal gyrus
6
Brodmann (1909) area 46
6
medulla oblongata
6
middle frontal gyrus
6
pons
6
subcutaneous abdominal adipose tissue
6
umbilical cord
5
amygdala
5
cerebellar cortex
5
cerebellum (Hemisphere)
5
germinal matrix
5
hypothalamus
5
nucleus accumbens
4
C1 segment of cervical spinal cord
4
amnion
4
anterior cingulate cortex
4
bone tissue
4
embryonic facial prominence
4
femur
4
gastrocnemius medialis(Muscle - Skeletal)
4
inferior parietal cortex
4
left ventricle myocardium
4
mucosa of stomach
4
rectum smooth muscle tissue
3
arm bone
3
cartilage tissue
3
cortex of kidney
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
germinal center
3
leg bone
3
prefrontal cortex
3
skin of body
3
suprapubic skin
3
visceral abdominal adipose tissue
2
hindlimb muscle
2
muscle of leg
2
breast carcinoma
2
chorion
2
dorsolateral prefrontal cortex
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
forelimb muscle
2
kidney epithelium
2
mammary gland
2
middle frontal area 46
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
corneal epithelium
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
fetal heart
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
intestinal epithelium
1
kidney - cortex
1
kidney - medulla
Organ
1
epithelium
1
pancreas
Date released
1
February, 2024
Software used
1
macs
Lab
1
Kyle Gaulton, UCSD
Project
1
AMP
RFA
1
AMP
annotation_type!
eQTL
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR366MMX
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Acinar
Lab:
Kyle Gaulton, UCSD
Project:
AMP