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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
1
variant allelic effects
Annotation Category
2
Target gene links
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
snATAC-seq
2
ATAC-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
19
endothelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
type II pneumocyte
5
keratinocyte
5
pancreatic acinar cell
4
luminal epithelial cell of mammary gland
4
mesothelial cell
4
pancreatic ductal cell
3
endocardial cell
3
endothelial cell of lymphatic vessel
3
goblet cell
3
hepatocyte
3
mammary gland epithelial cell
3
parietal cell
3
peptic cell
3
thyroid follicular cell
3
type I pneumocyte
2
basal cell of epidermis
2
cardiac endothelial cell
2
club cell
2
eccrine cell
2
endothelial cell of hepatic sinusoid
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
epithelial cell of esophagus
2
foveolar cell of stomach
2
granular cell of epidermis
2
myoepithelial cell
2
non keratinizing barrier epithelial cell
2
pancreatic A cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
paneth cell
2
respiratory goblet cell
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
type B pancreatic cell
2
type I cell of adrenal cortex
2
type II cell of adrenal cortex
1
bronchial goblet cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
enteroendocrine cell
1
gastric goblet cell
1
granulosa cell
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
parietal epithelial cell
1
placental villus capillary endothelial cell
1
retinal pigment epithelial cell
1
ureteric bud
Organ
5
epithelium
5
skin of body
Date released
4
November, 2021
1
February, 2024
Software used
2
abc
2
macs
1
deltasvm
Lab
14
AMP-T2D consortium
5
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
1
Stephen Parker, UMich
Project
4
ENCODE
1
AMP
RFA
4
ENCODE3
1
AMP
annotation_type!
eQTL
Showing 5 of 5 results
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Download
FileSet
DSR681TKD
released
Annotation file set
: Target gene predictions of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR385FIQ
released
Annotation file set
: Target gene predictions of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR919NQU
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR774OBV
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR684JHV
released
Annotation file set
: Variant allelic effects annotation of Keratinocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP