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Schema
Citing CMDGA
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Annotation type
4
accessible chromatin
3
differential activity
1
gene expression
1
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
snATAC-seq
Available data
4
bigWig
3
bed bed3+
1
bigBed narrowPeak
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
4
pancreatic ductal cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
endothelial cell
2
pancreatic polypeptide-secreting cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
type B pancreatic cell
Organ
4
epithelium
4
pancreas
Life stage
1
adult
Date released
3
February, 2024
1
January, 2021
Software used
4
macs
Lab
4
Kyle Gaulton, UCSD
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
3
AMP
1
T1D
RFA
3
AMP
1
T1D
annotation_type!
eQTL
Showing 4 of 4 results
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Download
FileSet
DSR473EZY
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of MUC5B Ductal
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR183WZN
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Ductal
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR780YWW
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of ductal
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR553FGJ
released
Annotation file set
: pancreatic ductal cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP