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Schema
Citing CMDGA
Clear Filters
Annotation type
8
accessible chromatin
6
gene expression
3
differential activity
3
target gene predictions
2
binding sites
2
histone modifications
1
variant allelic effects
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
ChIP-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Biosample term
6
pancreas
5
body of pancreas
5
pancreatic ductal cell
4
endocrine pancreas
4
pancreatic delta cell
3
islet of Langerhans
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
type B pancreatic cell
2
Panc1
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
Organ
5
epithelium
5
pancreas
Date released
2
February, 2021
1
January, 2021
1
May, 2021
1
November, 2021
Software used
2
abc
2
macs
1
cicero
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
1
Kyle Gaulton, UCSD
Project
3
AMP
1
ENCODE
1
T1D
RFA
3
AMP
1
ENCODE3
1
T1D
annotation_type!
eQTL
Showing 5 of 5 results
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Download
FileSet
DSR263AKI
released
Annotation file set
: Target gene predictions of Ductal Cell (Pancreatic) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR407MJH
released
Annotation file set
: Binding sites annotation for Pancreas PDAC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR780WQM
released
Annotation file set
: Binding sites annotation for Pancreas HPDE6 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR051SJQ
released
Annotation file set
: enhancer-gene predicton of pancreatic-ductal-cell-AMP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR946TIV
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of ductal
Lab:
Kyle Gaulton, UCSD
Project:
T1D