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Citing CMDGA
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Annotation type
8
accessible chromatin
6
gene expression
3
differential activity
2
binding sites
2
histone modifications
2
target gene predictions
1
variant allelic effects
Annotation Category
2
Target gene links
Annotation type Category
2
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
5
body of pancreas
5
pancreas
4
endocrine pancreas
3
pancreatic A cell
3
type B pancreatic cell
2
Panc1
2
pancreatic acinar cell
2
pancreatic ductal cell
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
islet of Langerhans
1
pancreatic delta cell
Organ
2
epithelium
2
pancreas
Date released
1
May, 2021
1
November, 2021
Software used
2
abc
cicero
Lab
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
annotation_type!
eQTL
software_used.software.name!
cicero
Showing 2 of 2 results
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Download
FileSet
DSR263AKI
released
Annotation file set
: Target gene predictions of Ductal Cell (Pancreatic) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR051SJQ
released
Annotation file set
: enhancer-gene predicton of pancreatic-ductal-cell-AMP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP