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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
3
ChIP-seq
DNase-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
32
islet of Langerhans
27
kidney
27
retina
26
liver
25
heart
24
brain
21
stomach
20
pigmented layer of retina
18
lung
18
placenta
17
small intestine
16
adrenal gland
16
muscle of arm
15
adipose tissue
15
muscle of leg
15
thymus
14
heart left ventricle
14
large intestine
14
subcutaneous adipose tissue
13
left lung
13
muscle of back
12
coronary artery
11
right lung
11
tibial nerve
10
caudate nucleus
10
right kidney
10
spleen
10
substantia nigra
10
tibial artery
9
left kidney
9
pancreas
9
renal cortex interstitium
9
renal pelvis
9
right atrium auricular region
8
body of pancreas
8
cerebellum
8
omental fat pad
8
putamen
8
spinal cord
7
ascending aorta
7
frontal cortex
7
heart right ventricle
7
layer of hippocampus
7
prostate gland
7
psoas muscle
6
Ammon's horn
6
amygdala
6
aorta
6
hypothalamus
6
left cardiac atrium
6
nucleus accumbens
6
ovary
6
sigmoid colon
6
skeletal muscle tissue
6
temporal lobe
6
testis
5
anterior cingulate cortex
5
cartilage tissue
5
right lobe of liver
5
thoracic aorta
5
thyroid gland
5
transverse colon
5
upper lobe of left lung
4
C1 segment of cervical spinal cord
4
angular gyrus
4
cerebellum (Hemisphere)
4
chorionic villus
4
colonic mucosa
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
esophagus
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
muscle of trunk
4
right cardiac atrium
4
skin of body
4
trophoblast
3
Peyer's patch
3
chorion membrane
3
cingulate gyrus
3
cortex of kidney
3
duodenal mucosa
3
esophagus muscularis mucosa
3
midbrain
3
mucosa of rectum
3
stomach smooth muscle
3
vagina
2
Brodmann (1909) area 46
2
blood
2
breast carcinoma
2
breast epithelium
2
dorsolateral prefrontal cortex
2
endometrium cancer
2
esophagus squamous epithelium
2
eye
2
first pancreatic bud
2
germinal matrix
2
globus pallidus
2
kidney epithelium
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mammary gland
2
muscle layer of colon
2
muscle layer of duodenum
2
occipital lobe
2
pancreatic ductal cell
2
pancreatic stellate cell
2
parathyroid adenoma
2
pituitary gland
2
prefrontal cortex
2
rectum smooth muscle tissue
2
respiratory system smooth muscle
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
superior temporal gyrus
2
tissue
2
tongue
2
umbilical cord
2
urinary bladder
2
uterus
2
visceral abdominal adipose tissue
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
amnion
1
anterior parahippocampal gyrus
1
aorta wall
1
arcuate nucleus of hypothalamus
1
arm bone
1
bed nucleus of stria terminalis
1
bladder (urinary bladder)
1
breast
1
caput epididymis
1
cardiogenic mesoderm
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebrospinal fluid
1
circle of Willis
1
claustrum of brain
1
colon
1
colon sigmoid
1
corneal epithelium
1
cortex
1
dentate nucleus
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
embryonic facial prominence
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus mucosa
1
fallopian tube
1
femur
1
frontal pole
1
gastric (mucosa of stomach)
1
gastroesophageal sphincter
1
germinal center
1
gyrus rectus
1
inferior parietal cortex
1
intestinal epithelium
1
leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
middle frontal gyrus
1
minor salivary gland
1
morula
1
mucosa of stomach
1
myelencephalon
1
nephron tubule
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pons
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
proximal epiphysis
Organ
1
lymphoid tissue
Life stage
1
unknown
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
gene expression
annotation_type_category!
DNase-seq
Showing 1 of 1 results
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Download
FileSet
DSR910NQX
released
Annotation file set
: Chromatin states for BSS00384 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP