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Schema
Citing CMDGA
Clear Filters
Annotation type
4
gene expression
target gene predictions
1
variant allelic effects
Annotation Category
4
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
RNA-seq
2
scRNA-seq
1
ATAC-seq
Available data
4
tsv
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
32
hematopoietic multipotent progenitor cell
26
neural progenitor cell
16
adipocyte
12
embryonic stem cell
11
cardiomyocytes
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
7
mesenchymal stem cell
6
cardiac muscle cell
6
endodermal cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
cardiac precursors (cardiac muscle cell)
5
cardiomyocytes (cardiac muscle cell)
5
chondrocyte
5
mesendoderm
5
mesodermal cell
5
neuronal stem cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
bipolar neuron
4
muscle cell
4
neural cell
4
smooth muscle cell
3
T-cell acute lymphoblastic leukemia
3
adipose-derived stem cell
3
ectodermal cell
3
hepatocyte
3
hepatocyte(AFP)
3
islet precursor cell
3
neuron
3
olfactory neurosphere cell line
3
pancreatic ductal cell
3
trophoblast cell
2
B cell
2
cardiac mesoderm primordium
2
cardiac myoblast
2
cardiovascular progenitor cell
2
colon adenocarcinoma
2
dermis microvascular lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
excitatory neuron
2
foreskin keratinocyte
2
foreskin melanocyte
2
hippocampal neuron
2
iPS DF 4.7 Cell Line
2
lower motor neuron
2
mammary gland epithelial cell
2
myocyte
2
neuroblastoma cell line
2
neuroepithelial stem cell
1
Adipose SGBS cell line (adipocyte)
1
BICR 31
1
CD4-positive helper T cell
1
CD8-Positive T-Lymphocytes
1
CD8-positive, alpha-beta T cell
1
EAhy 926 cell
1
Preadipose SGBS cell line (adipocyte)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
T-lymphoma cell line
1
Th1 cell
1
atypical teratoid rhabdoid tumor
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors
1
chronic myelomonocytic leukemia
1
colorectal adenocarcinoma
1
diffuse intrinsic pontine glioma
1
diffuse large B-cell lymphoma
1
ecto neural progenitor cell
1
endometrial stromal cell
1
endometrial stromal tumor
1
endothelial cell
1
epidermal stem cell
1
erythroid cell
1
erythroid progenitor cell
1
esophageal adenocarcinoma
1
fibroblast
1
hematopoietic stem cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
mid-neurogenesis radial glial cells
1
myotube
1
natural killer cell
1
neuron cell of Hypothalamus (neuron)
1
osteosarcoma
1
radial glial cell
1
renal cell carcinoma
1
skin fibroblast
1
stem cell
Disease term
1
heart failure
Life stage
1
unknown
Date released
2
February, 2021
1
March, 2020
1
May, 2020
1
May, 2021
Software used
4
r
1
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
histone modifications
target gene predictions
Showing 5 of 5 results
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Download
FileSet
DSR595RQT
released
Annotation file set
: Gene expression annotation of cardiac muscle cell_cardiomyocyte (CM) ISL1-TNNT2+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR827XKT
released
Annotation file set
: RPKM gene expression levels of cardiomyocytes (cardiac muscle cell) from GSE95143 scRNA-seq of heart failure patients with dilated cardiomyopathy
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR210PMK
released
Annotation file set
: RPKM gene expression levels of cardiomyocytes (cardiac muscle cell) from GSE95143 scRNA-seq of healthy patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR008HPH
released
Annotation file set
: Genetic variants with deltaSVM prediction in cardiomyocyte ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259JVL
released
Annotation file set
: Gene expression levels of cardiomyocytes (cardiac muscle cell) from RNA-seq (GSE106690 and E-MTAB-6013)
Lab:
AMP-T2D consortium
Project:
AMP