Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
5
hg19
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
65
heart
65
stomach
54
kidney
51
lung
50
muscle of arm
49
brain
47
adrenal gland
47
small intestine
43
placenta
42
large intestine
42
muscle of leg
41
muscle of back
39
left lung
37
liver
36
islet of Langerhans
36
thymus
34
retina
34
right lung
31
right kidney
30
renal cortex interstitium
30
renal pelvis
27
left kidney
26
spleen
25
adipose tissue
23
spinal cord
21
heart left ventricle
20
pigmented layer of retina
18
sigmoid colon
16
body of pancreas
16
ovary
16
psoas muscle
15
pancreas
14
gastrocnemius medialis
14
subcutaneous adipose tissue
14
thyroid gland
14
tibial nerve
14
transverse colon
13
heart right ventricle
13
muscle of trunk
13
testis
12
caudate nucleus
12
chorionic villus
12
skeletal muscle tissue
12
upper lobe of left lung
11
Peyer's patch
11
endocrine pancreas
11
layer of hippocampus
10
omental fat pad
10
right atrium auricular region
9
aorta
9
breast epithelium
9
coronary artery
9
esophagus squamous epithelium
9
left renal cortex interstitium
9
left renal pelvis
9
prostate gland
9
right renal pelvis
9
substantia nigra
9
temporal lobe
9
tibial artery
9
trophoblast
8
ascending aorta
8
esophagus muscularis mucosa
8
frontal cortex
8
lower leg skin
8
right renal cortex interstitium
7
cerebellum
7
chorion membrane
7
cingulate gyrus
7
colonic mucosa
7
duodenal mucosa
7
esophagus
7
eye
7
mucosa of rectum
7
parathyroid adenoma
7
stomach smooth muscle
7
thoracic aorta
7
tongue
7
uterus
7
vagina
6
Ammon's horn
6
angular gyrus
6
gastroesophageal sphincter
6
limb
6
muscle layer of colon
6
muscle layer of duodenum
6
putamen
6
subcutaneous abdominal adipose tissue
6
urinary bladder
5
globus pallidus
5
left cardiac atrium
5
midbrain
5
occipital lobe
5
right cardiac atrium
4
Brodmann (1909) area 46
4
bone tissue
4
cartilage tissue
4
medulla oblongata
4
middle frontal gyrus
4
pons
4
right lobe of liver
4
superior temporal gyrus
4
umbilical cord
3
amnion
3
cerebellar cortex
3
embryonic facial prominence
3
femur
3
germinal matrix
3
inferior parietal cortex
3
mucosa of stomach
3
rectum smooth muscle tissue
3
suprapubic skin
3
visceral abdominal adipose tissue
2
muscle of leg
2
arm bone
2
blood
2
cerebellum (Hemisphere)
2
chorion
2
cortex of kidney
2
dorsolateral prefrontal cortex
2
fallopian tube
2
germinal center
2
leg bone
2
middle frontal area 46
2
placental basal plate
2
prefrontal cortex
2
skeletal muscle
2
skin of body
2
tissue
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
C1 segment of cervical spinal cord
1
Pancreatic islets
1
amygdala
1
anterior cingulate cortex
1
aorta wall
1
aortic valve
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast - mammary tissue
1
breast carcinoma
1
caput epididymis
1
cardiac ventricle
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
colon
1
colon - sigmoid
1
colon - transverse
1
crypt of Lieberkuhn
1
diencephalon
1
endometrium
1
endometrium cancer
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
first pancreatic bud
1
forelimb muscle
1
gastric (mucosa of stomach)
1
gastrocnemius medialis(Muscle - Skeletal)
1
glomerular epithelium
1
hindlimb muscle
1
hypothalamus
1
kidney - cortex
1
kidney - medulla
1
kidney epithelium
1
left leg bone
1
left ventricle myocardium
1
mammary gland
1
medulloblastoma
1
metanephros
1
mid-frontal lobe
1
minor salivary gland
1
mitral valve
1
nephron tubule
1
nucleus accumbens
1
parietal lobe
1
pituitary
1
prostate
1
pulmonary valve
1
rectal smooth muscle tissue
1
renal connecting tubule
1
renal cortex tubule
1
renal glomerulus
1
respiratory system smooth muscle
1
right arm bone
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
skin of forearm
1
skin of prepuce of penis
1
small intestine - terminal Ileum
1
synovial joint
1
thyroid
1
tricuspid valve
1
white adipose tissue
1
whole blood
Organ
3
brain
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
histone modifications
assembly!
GRCh38
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR595ZZM
released
Annotation file set
: Candidate regulatory elements for BSS00201 cerebellar cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR918SHV
released
Annotation file set
: Target gene predictions for BSS00201 cerebellar cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR891ASN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cerebellar cortex
Lab:
AMP-T2D consortium
Project:
AMP