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Schema
Citing CMDGA
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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
89
heart
85
stomach
79
kidney
70
brain
68
lung
67
muscle of arm
63
small intestine
62
adrenal gland
58
muscle of leg
58
placenta
55
large intestine
54
muscle of back
52
left lung
47
liver
47
thymus
45
right lung
43
islet of Langerhans
42
right kidney
40
renal cortex interstitium
40
renal pelvis
39
retina
36
left kidney
34
spleen
33
heart left ventricle
32
adipose tissue
31
spinal cord
25
tibial nerve
24
body of pancreas
23
sigmoid colon
21
caudate nucleus
21
coronary artery
21
ovary
21
pancreas
21
subcutaneous adipose tissue
20
pigmented layer of retina
20
psoas muscle
19
heart right ventricle
19
right atrium auricular region
19
thyroid gland
19
tibial artery
19
transverse colon
18
gastrocnemius medialis
18
omental fat pad
17
muscle of trunk
17
substantia nigra
17
testis
16
ascending aorta
16
chorionic villus
16
frontal cortex
15
cerebellum
15
endocrine pancreas
15
layer of hippocampus
15
skeletal muscle tissue
15
upper lobe of left lung
14
Peyer's patch
14
putamen
13
aorta
13
temporal lobe
12
Ammon's horn
12
left cardiac atrium
12
left renal cortex interstitium
12
left renal pelvis
12
prostate gland
12
right renal pelvis
11
breast epithelium
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
11
right renal cortex interstitium
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
chorion membrane
10
esophagus
10
lower leg skin
10
vagina
9
cingulate gyrus
9
colonic mucosa
9
duodenal mucosa
9
eye
9
mucosa of rectum
9
parathyroid adenoma
9
right lobe of liver
9
stomach smooth muscle
9
tongue
9
uterus
8
limb
8
muscle layer of colon
8
muscle layer of duodenum
8
right cardiac atrium
8
urinary bladder
7
gastroesophageal sphincter
7
globus pallidus
7
midbrain
7
occipital lobe
6
Brodmann (1909) area 46
6
amygdala
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
hypothalamus
6
medulla oblongata
6
middle frontal gyrus
6
nucleus accumbens
6
pons
6
skin of body
6
subcutaneous abdominal adipose tissue
6
superior temporal gyrus
5
C1 segment of cervical spinal cord
5
cerebellar cortex
5
gastrocnemius medialis(Muscle - Skeletal)
5
germinal matrix
5
left ventricle myocardium
5
umbilical cord
4
amnion
4
bone tissue
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
embryonic facial prominence
4
femur
4
inferior parietal cortex
4
mucosa of stomach
4
rectum smooth muscle tissue
4
visceral abdominal adipose tissue
3
arm bone
3
cortex of kidney
3
dorsolateral prefrontal cortex
3
germinal center
3
leg bone
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
blood
2
chorion
2
fallopian tube
2
forelimb muscle
2
middle frontal area 46
2
minor salivary gland
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
prefrontal cortex
2
skeletal muscle
2
tissue
1
left kidney
1
omental fat pad
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
aorta wall
1
aortic valve
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
breast carcinoma
1
caput epididymis
1
cardiac ventricle
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
cortex
1
crypt of Lieberkuhn
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endometrium
1
endometrium cancer
1
endothelial cell
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fetal heart
1
first pancreatic bud
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
hindlimb muscle
1
kidney - cortex
1
kidney - medulla
1
kidney epithelium
1
left leg bone
1
mammary gland
1
medulloblastoma
1
metanephros
1
mid-frontal lobe
1
mitral valve
1
nephron tubule
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
parietal lobe
Organ
1
kidney
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
histone modifications
Showing 1 of 1 results
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Download
FileSet
DSR468ICH
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP