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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
64
heart
62
stomach
56
kidney
50
brain
50
muscle of arm
49
lung
45
small intestine
44
muscle of leg
43
adrenal gland
42
placenta
41
large intestine
41
muscle of back
39
left lung
34
right lung
33
retina
33
thymus
31
right kidney
30
renal cortex interstitium
30
renal pelvis
27
left kidney
27
liver
24
spleen
22
heart left ventricle
22
spinal cord
20
pigmented layer of retina
16
adipose tissue
16
sigmoid colon
14
pancreas
13
gastrocnemius medialis
13
ovary
13
thyroid gland
13
tibial nerve
13
transverse colon
12
body of pancreas
12
chorionic villus
12
heart right ventricle
12
muscle of trunk
12
psoas muscle
12
testis
12
upper lobe of left lung
11
Peyer's patch
11
caudate nucleus
11
endocrine pancreas
11
islet of Langerhans
11
layer of hippocampus
10
temporal lobe
9
coronary artery
9
esophagus squamous epithelium
9
left cardiac atrium
9
left renal cortex interstitium
9
left renal pelvis
9
omental fat pad
9
prostate gland
9
right renal pelvis
9
skeletal muscle tissue
9
tibial artery
8
angular gyrus
8
aorta
8
ascending aorta
8
breast epithelium
8
esophagus muscularis mucosa
8
lower leg skin
8
right atrium auricular region
8
right renal cortex interstitium
8
substantia nigra
8
thoracic aorta
8
trophoblast
7
chorion membrane
7
cingulate gyrus
7
colonic mucosa
7
duodenal mucosa
7
eye
7
mucosa of rectum
7
parathyroid adenoma
7
stomach smooth muscle
7
tongue
6
cerebellum
6
esophagus
6
frontal cortex
6
gastroesophageal sphincter
6
limb
6
muscle layer of colon
6
muscle layer of duodenum
6
subcutaneous abdominal adipose tissue
6
urinary bladder
6
vagina
5
Ammon's horn
5
globus pallidus
5
midbrain
5
putamen
5
right cardiac atrium
5
subcutaneous adipose tissue
5
uterus
4
Brodmann (1909) area 46
4
cerebellar cortex
4
germinal matrix
4
medulla oblongata
4
middle frontal gyrus
4
occipital lobe
4
pons
4
superior temporal gyrus
4
umbilical cord
3
amnion
3
embryonic facial prominence
3
femur
3
inferior parietal cortex
3
mucosa of stomach
3
rectum smooth muscle tissue
3
right lobe of liver
3
suprapubic skin
2
arm bone
2
chorion
2
cortex of kidney
2
forelimb muscle
2
germinal center
2
leg bone
2
middle frontal area 46
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
prefrontal cortex
2
skin of body
1
hindlimb muscle
1
Schwann cell
1
breast carcinoma
1
caput epididymis
1
colon
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endometrium
1
endometrium cancer
1
endothelial cell
1
epididymis
1
fallopian tube
1
fetal heart
1
first pancreatic bud
1
glomerular epithelium
1
hindlimb muscle
1
kidney epithelium
1
left leg bone
1
mammary gland
1
medulloblastoma
1
mid-frontal lobe
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
rectal smooth muscle tissue
1
renal connecting tubule
1
renal cortex tubule
1
respiratory system smooth muscle
1
right arm bone
1
skeletal muscle
1
skin of forearm
1
skin of prepuce of penis
1
tissue-resident macrophage
1
type B pancreatic cell
Date released
1
February, 2024
Software used
1
macs
Lab
1
Kyle Gaulton, UCSD
Project
1
AMP
RFA
1
AMP
annotation_type!
histone modifications
Showing 1 of 1 results
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Download
FileSet
DSR642XNX
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Immune
Lab:
Kyle Gaulton, UCSD
Project:
AMP