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Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
7
ChIP-seq
DNase-seq
1
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
4
hg19
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
35
islet of Langerhans
23
retina
20
pigmented layer of retina
15
liver
12
subcutaneous adipose tissue
11
adipose tissue
9
kidney
5
heart
4
bone tissue
4
cartilage tissue
4
heart left ventricle
4
pancreas
3
aorta
3
heart right ventricle
3
omental fat pad
3
psoas muscle
3
right atrium auricular region
3
skeletal muscle tissue
3
spleen
3
thymus
3
tibial nerve
3
visceral abdominal adipose tissue
2
Ammon's horn
2
adrenal gland
2
blood
2
body of pancreas
2
brain
2
caudate nucleus
2
cerebellum
2
coronary artery
2
dorsolateral prefrontal cortex
2
fallopian tube
2
frontal cortex
2
layer of hippocampus
2
lung
2
ovary
2
prostate gland
2
right cardiac atrium
2
skeletal muscle
2
substantia nigra
2
temporal lobe
2
testis
2
tibial artery
2
tissue
2
trophoblast
1
C1 segment of cervical spinal cord
1
Pancreatic islets
1
amygdala
1
anterior cingulate cortex
1
aorta wall
1
aortic valve
1
ascending aorta
1
bladder
1
bladder (urinary bladder)
1
breast - mammary tissue
1
breast carcinoma
1
caput epididymis
1
cerebellum (Hemisphere)
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
cingulate gyrus
1
colon
1
colon - sigmoid
1
colon - transverse
1
colonic mucosa
1
cortex of kidney
1
diencephalon
1
duodenal mucosa
1
endometrium
1
endometrium cancer
1
epididymis
1
esophagus
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
first pancreatic bud
1
gastric (mucosa of stomach)
1
gastrocnemius medialis(Muscle - Skeletal)
1
hypothalamus
1
kidney - cortex
1
kidney - medulla
1
kidney epithelium
1
left cardiac atrium
1
left ventricle myocardium
1
mammary gland
1
medulloblastoma
1
metanephros
1
mid-frontal lobe
1
midbrain
1
minor salivary gland
1
mitral valve
1
mucosa of rectum
1
nephron tubule
1
nucleus accumbens
1
occipital lobe
1
parietal lobe
1
pituitary
1
placenta
1
prefrontal cortex
1
prostate
1
pulmonary valve
1
putamen
1
rectum smooth muscle tissue
1
renal connecting tubule
1
renal glomerulus
1
respiratory system smooth muscle
1
right lobe of liver
1
sigmoid colon
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
skin of forearm
1
skin of prepuce of penis
1
small intestine
1
small intestine - terminal Ileum
1
stomach
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
synovial joint
1
thoracic aorta
1
thyroid
1
tricuspid valve
1
upper lobe of left lung
1
uterus
1
vagina
1
whole blood
Organ
2
embryo
Date released
1
February, 2021
1
March, 2020
Software used
1
macs
1
nospecificsoft_customcode
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
histone modifications
annotation_type_category!
DNase-seq
assembly!
GRCh38
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR678UGU
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_trophoblast_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR181ORU
released
Annotation file set
: A target gene prediction annotation in Human Trophoblast of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP