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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
chromatin state
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
5
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
61
stomach
57
heart
50
lung
49
muscle of arm
46
small intestine
45
adrenal gland
45
brain
43
kidney
41
large intestine
41
muscle of back
41
muscle of leg
41
placenta
39
left lung
34
thymus
33
right lung
30
right kidney
29
renal cortex interstitium
28
renal pelvis
27
left kidney
23
liver
23
spleen
22
spinal cord
18
heart left ventricle
17
sigmoid colon
15
adipose tissue
15
psoas muscle
14
ovary
13
body of pancreas
13
gastrocnemius medialis
13
muscle of trunk
13
thyroid gland
13
transverse colon
12
chorionic villus
11
endocrine pancreas
11
heart right ventricle
10
Peyer's patch
10
pancreas
10
testis
10
upper lobe of left lung
9
layer of hippocampus
9
retina
9
skeletal muscle tissue
9
tibial nerve
8
aorta
8
breast epithelium
8
caudate nucleus
8
esophagus squamous epithelium
8
left renal cortex interstitium
8
left renal pelvis
8
lower leg skin
8
right renal pelvis
7
esophagus
7
esophagus muscularis mucosa
7
omental fat pad
7
parathyroid adenoma
7
right renal cortex interstitium
7
substantia nigra
7
temporal lobe
7
trophoblast
6
angular gyrus
6
ascending aorta
6
chorion membrane
6
cingulate gyrus
6
colonic mucosa
6
coronary artery
6
duodenal mucosa
6
eye
6
gastroesophageal sphincter
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
prostate gland
6
stomach smooth muscle
6
thoracic aorta
6
tongue
6
vagina
5
cerebellum
5
limb
5
right atrium auricular region
5
subcutaneous abdominal adipose tissue
5
tibial artery
5
urinary bladder
5
uterus
4
Ammon's horn
4
Brodmann (1909) area 46
4
frontal cortex
4
right cardiac atrium
3
amnion
3
cerebellar cortex
3
femur
3
germinal matrix
3
globus pallidus
3
left cardiac atrium
3
middle frontal gyrus
3
mucosa of stomach
3
putamen
3
right lobe of liver
3
suprapubic skin
3
umbilical cord
2
arm bone
2
chorion
2
embryonic facial prominence
2
germinal center
2
inferior parietal cortex
2
leg bone
2
medulla oblongata
2
midbrain
2
middle frontal area 46
2
occipital lobe
2
placental basal plate
2
pons
2
rectum smooth muscle tissue
2
skin of body
2
subcutaneous adipose tissue
2
superior temporal gyrus
1
beige adipocyte
1
bladder (urinary bladder)
1
cardiac ventricle
1
dorsolateral prefrontal cortex
1
forelimb muscle
1
gastric (mucosa of stomach)
1
hindlimb muscle
1
islet of Langerhans
1
left leg bone
1
rectal smooth muscle tissue
1
right arm bone
1
white adipose tissue
Organ
5
uterus
Life stage
4
adult
Date released
2
February, 2021
2
September, 2022
1
May, 2021
Software used
2
encode-ccres
2
r
1
abc
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
annotation_type!
histone modifications
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR903VBR
released
Annotation file set
: Candidate regulatory elements for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR090SSF
released
Annotation file set
: Target gene predictions for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR196WYN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE uterus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703DFT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE uterus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR254PVY
released
Annotation file set
: enhancer-gene predicton of uterus-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP