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Schema
Citing CMDGA
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Annotation type
7
eQTL
6
candidate regulatory elements
4
accessible chromatin
4
target gene predictions
2
chromatin state
histone modifications
1
binding sites
1
caQTL
1
differential activity
1
gene expression
Annotation Category
4
Target gene links
Annotation type Category
2
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
1
HiC
1
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
psoas muscle
3
adrenal gland
3
liver
3
pancreas
3
thymus
2
adipose tissue
2
aorta
2
heart left ventricle
2
heart right ventricle
2
ovary
2
sigmoid colon
2
small intestine
2
spleen
2
stomach
1
Ammon's horn
1
beige adipocyte
1
bladder (urinary bladder)
1
body of pancreas
1
breast epithelium
1
cardiac ventricle
1
coronary artery
1
dorsolateral prefrontal cortex
1
esophagus
1
gastric (mucosa of stomach)
1
gastrocnemius medialis
1
heart
1
islet of Langerhans
1
large intestine
1
lung
1
muscle of leg
1
muscle of trunk
1
placenta
1
right cardiac atrium
1
spinal cord
1
thyroid gland
1
transverse colon
1
trophoblast
1
uterus
1
white adipose tissue
Organ
3
liver
1
adipose tissue
1
connective tissue
Life stage
1
adult
Date released
September, 2022
2
March, 2020
2
May, 2021
Software used
2
abc
1
hiccups
1
nospecificsoft_customcode
Lab
2
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
annotation_type!
histone modifications
month_released!
September, 2022
Showing 4 of 4 results
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FileSet
DSR494KQG
released
Annotation file set
: enhancer-gene predicton of liver-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR405NVR
released
Annotation file set
: enhancer-gene predicton of brite_adipose-Loft2014 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR940SFE
released
Annotation file set
: A target gene prediction annotation in liver of DSR477FKL Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR605JRF
released
Annotation file set
: A target gene prediction annotation in Human Liver of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP