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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
88
heart
85
stomach
79
kidney
69
brain
68
lung
67
muscle of arm
63
small intestine
62
adrenal gland
58
muscle of leg
58
placenta
55
large intestine
54
muscle of back
52
left lung
47
thymus
46
liver
45
right lung
43
islet of Langerhans
42
right kidney
40
renal cortex interstitium
40
renal pelvis
37
retina
36
left kidney
34
spleen
32
adipose tissue
32
heart left ventricle
31
spinal cord
23
sigmoid colon
22
body of pancreas
22
tibial nerve
21
ovary
21
pancreas
20
caudate nucleus
20
coronary artery
20
pigmented layer of retina
20
psoas muscle
19
heart right ventricle
19
subcutaneous adipose tissue
19
thyroid gland
19
transverse colon
18
gastrocnemius medialis
18
tibial artery
17
muscle of trunk
17
right atrium auricular region
17
testis
16
chorionic villus
16
omental fat pad
16
substantia nigra
15
ascending aorta
15
endocrine pancreas
15
layer of hippocampus
15
upper lobe of left lung
14
Peyer's patch
14
frontal cortex
14
skeletal muscle tissue
13
aorta
13
putamen
12
cerebellum
12
left cardiac atrium
12
left renal cortex interstitium
12
left renal pelvis
12
prostate gland
12
right renal pelvis
12
temporal lobe
11
Ammon's horn
11
breast epithelium
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
11
right renal cortex interstitium
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
chorion membrane
10
esophagus
10
lower leg skin
10
vagina
9
cingulate gyrus
9
colonic mucosa
9
duodenal mucosa
9
eye
9
mucosa of rectum
9
parathyroid adenoma
9
stomach smooth muscle
9
tongue
9
uterus
8
limb
8
muscle layer of colon
8
muscle layer of duodenum
8
right cardiac atrium
8
right lobe of liver
7
gastroesophageal sphincter
7
globus pallidus
7
midbrain
6
Brodmann (1909) area 46
6
medulla oblongata
6
middle frontal gyrus
6
occipital lobe
6
pons
6
skin of body
6
subcutaneous abdominal adipose tissue
6
superior temporal gyrus
5
amygdala
5
anterior cingulate cortex
5
cerebellar cortex
5
cerebellum (Hemisphere)
5
germinal matrix
5
hypothalamus
5
nucleus accumbens
5
umbilical cord
4
C1 segment of cervical spinal cord
4
amnion
4
bone tissue
4
cartilage tissue
4
embryonic facial prominence
4
femur
4
inferior parietal cortex
4
mucosa of stomach
4
rectum smooth muscle tissue
4
visceral abdominal adipose tissue
3
arm bone
3
cortex of kidney
3
dorsolateral prefrontal cortex
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
gastrocnemius medialis(Muscle - Skeletal)
3
germinal center
3
left ventricle myocardium
3
leg bone
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
blood
2
chorion
2
fallopian tube
2
forelimb muscle
2
middle frontal area 46
2
minor salivary gland
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
prefrontal cortex
2
skeletal muscle
2
tissue
1
left kidney
1
omental fat pad
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
aorta wall
1
aortic valve
1
beige adipocyte
1
breast
1
breast - mammary tissue
1
breast carcinoma
1
caput epididymis
1
cardiac ventricle
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
cortex
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endometrium
1
endometrium cancer
1
endothelial cell
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fetal heart
1
first pancreatic bud
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
hindlimb muscle
1
kidney - cortex
1
kidney - medulla
1
kidney epithelium
1
left leg bone
1
mammary gland
1
medulloblastoma
1
mid-frontal lobe
1
mitral valve
1
nephron tubule
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pituitary
1
pituitary gland
1
prostate
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
Organ
1
intestine
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
histone modifications
organ_slims!
urinary bladder
month_released!
February, 2020
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR420NWX
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Colon crypt from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP