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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
86
heart
84
stomach
69
kidney
67
brain
67
lung
66
muscle of arm
64
HeLa-S3
62
small intestine
61
A549
61
adrenal gland
57
muscle of leg
57
placenta
55
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
53
H1-hESC
52
left lung
47
thymus
45
right lung
44
liver
42
hematopoietic multipotent progenitor cell
41
right kidney
40
K562
39
renal cortex interstitium
39
renal pelvis
36
B cell
36
islet of Langerhans
36
left kidney
35
neural progenitor cell
33
spinal cord
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
spleen
29
adipose tissue
29
heart left ventricle
26
endothelial cell
26
monocyte
24
MCF-7
24
body of pancreas
23
adipocyte
23
retina
23
sigmoid colon
22
CD8-positive, alpha-beta memory T cell
22
epithelial cell of proximal tubule
22
regulatory T cell
22
tibial nerve
22
trophoblast cell
21
EndoC_BH1
21
foreskin keratinocyte
21
hepatocyte
20
T-helper 1 cell
20
glomerular endothelial cell
20
mononuclear cell
20
psoas muscle
19
caudate nucleus
19
ovary
18
HFFc6
18
T-helper 17 cell
18
endothelial cell of umbilical vein
18
gastrocnemius medialis
17
CD8-positive, alpha-beta T cell
17
foreskin fibroblast
17
heart right ventricle
17
mesenchymal stem cell
17
muscle of trunk
17
natural killer cell
17
smooth muscle cell
17
subcutaneous adipose tissue
17
thyroid gland
17
transverse colon
16
chorionic villus
16
coronary artery
16
embryonic stem cell
16
fibroblast of lung
16
induced pluripotent stem cell
16
keratinocyte
16
omental fat pad
16
pancreas
16
pancreatic ductal cell
16
right atrium auricular region
16
tibial artery
15
GM12878
15
H9
15
T cell
15
skeletal muscle tissue
15
testis
15
upper lobe of left lung
14
CD4-positive, alpha-beta T cell
14
ascending aorta
14
endocrine pancreas
14
fibroblast
14
mammary gland epithelial cell
14
neutrophil
14
skeletal muscle myoblast
14
substantia nigra
13
Peyer's patch
13
T-helper 2 cell
13
aorta
13
layer of hippocampus
13
neurosphere
12
cardiac muscle cell
12
cerebellum
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
frontal cortex
12
macrophage
12
temporal lobe
11
Ammon's horn
11
breast epithelium
11
osteoblast
10
HepG2
10
bronchial epithelial cell
10
epithelial cell of prostate
10
esophagus squamous epithelium
10
left cardiac atrium
10
left renal cortex interstitium
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
prostate gland
10
retinal pigment epithelial cell
10
right renal cortex interstitium
10
trophoblast
9
22Rv1
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
endothelial cell of hepatic sinusoid
9
glomerular visceral epithelial cell
9
left renal pelvis
9
mammary epithelial cell
9
pancreatic delta cell
9
parathyroid adenoma
9
pericyte cell
9
progenitor cell of endocrine pancreas
9
putamen
9
right renal pelvis
9
skeletal muscle satellite cell
9
skin fibroblast
9
thoracic aorta
9
tongue
8
HEK293
8
NAMALWA cell
8
breast cancer cell
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
esophagus
8
esophagus muscularis mucosa
8
immortal human breast epithelial cell line cell
8
kidney tubule cell
8
limb
8
lower leg skin
8
lymphocyte
8
myoepithelial cell of mammary gland
8
naive T cell
8
pancreatic acinar cell
8
pituitary stalk
8
vagina
7
GM06990
7
GM12864
7
GM12865
7
IMR-90
7
SK-N-DZ
7
T47D
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast cell line
7
kidney glomerular epithelial cell
7
pancreatic beta cell
7
right lobe of liver
7
stomach smooth muscle
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Brodmann (1909) area 46
6
CD1c-positive myeloid dendritic cell
6
CD4-positive helper T cell
6
CMK
6
Caco-2 cell
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12875
6
GM19240
6
GM23248
6
HAP-1
6
HT-29
6
HUES8
6
LoVo cell
6
OCI-LY7
6
SJSA1
6
SK-N-MC
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
annotation_type!
histone modifications
month_released!
January, 2022
files.file_type!
bigWig
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP