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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
88
heart
84
stomach
71
kidney
68
brain
67
lung
67
muscle of arm
64
HeLa-S3
62
small intestine
61
A549
61
adrenal gland
58
muscle of leg
57
placenta
55
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
47
thymus
45
H1-hESC
45
right lung
42
B cell
42
hematopoietic multipotent progenitor cell
42
monocyte
42
right kidney
40
K562
40
liver
40
renal cortex interstitium
40
renal pelvis
39
retina
36
endothelial cell
36
left kidney
33
hepatocyte
33
islet of Langerhans
33
spinal cord
33
spleen
32
CD4-positive, alpha-beta memory T cell
32
heart left ventricle
31
CD14-positive monocyte
28
adipose tissue
28
fibroblast
25
adipocyte
25
regulatory T cell
25
smooth muscle cell
24
MCF-7
24
body of pancreas
24
tibial nerve
23
macrophage
23
pancreatic ductal cell
23
sigmoid colon
22
CD8-positive, alpha-beta memory T cell
22
EndoC_BH1
22
T-helper 1 cell
22
epithelial cell of proximal tubule
22
pericyte cell
22
trophoblast cell
21
foreskin keratinocyte
20
CD8-positive, alpha-beta T cell
20
T cell
20
caudate nucleus
20
coronary artery
20
glomerular endothelial cell
20
mononuclear cell
20
pancreas
20
pigmented layer of retina
20
psoas muscle
19
T-helper 17 cell
19
endothelial cell of umbilical vein
19
natural killer cell
19
ovary
18
HFFc6
18
gastrocnemius medialis
18
heart right ventricle
18
keratinocyte
18
mesenchymal stem cell
18
neural progenitor cell
18
pancreatic beta cell
18
right atrium auricular region
18
tibial artery
17
foreskin fibroblast
17
muscle of trunk
17
pancreatic alpha cell
17
subcutaneous adipose tissue
17
thyroid gland
17
transverse colon
16
T-helper 2 cell
16
chorionic villus
16
embryonic stem cell
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
16
induced pluripotent stem cell
16
omental fat pad
15
CD4-positive, alpha-beta T cell
15
GM12878
15
ascending aorta
15
astrocyte
15
cardiac muscle cell
15
osteoblast
15
pancreatic acinar cell
15
pancreatic delta cell
15
retinal pigment epithelial cell
15
skeletal muscle myoblast
15
testis
15
upper lobe of left lung
14
H9
14
endocrine pancreas
14
fibroblast of cardiac tissue
14
frontal cortex
14
mammary gland epithelial cell
14
neutrophil
14
skeletal muscle tissue
14
substantia nigra
13
Peyer's patch
13
layer of hippocampus
13
neurosphere
13
skeletal muscle satellite cell
12
Ammon's horn
12
aorta
12
cerebellum
12
excitatory neuron
12
fibroblast of dermis
12
left renal cortex interstitium
12
temporal lobe
11
breast epithelium
11
erythroblast
11
left renal pelvis
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
putamen
11
right renal pelvis
10
bronchial epithelial cell
10
epithelial cell of prostate
10
esophagus squamous epithelium
10
glomerular visceral epithelial cell
10
kidney tubule cell
10
left cardiac atrium
10
pancreatic stellate cell
10
prostate gland
10
right renal cortex interstitium
10
skin fibroblast
10
thoracic aorta
10
trophoblast
9
22Rv1
9
HepG2
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
mammary epithelial cell
9
parathyroid adenoma
9
progenitor cell of endocrine pancreas
9
tongue
8
NAMALWA cell
8
breast cancer cell
8
choroid plexus epithelial cell
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
esophagus
8
esophagus muscularis mucosa
8
hepatic stellate cell
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
lymphocyte
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
skeletal muscle fiber
8
vagina
7
GM12864
7
GM12865
7
HEK293
7
IMR-90
7
SK-N-DZ
7
T47D
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast cell line
7
kidney glomerular epithelial cell
7
memory B cell
7
renal cortical epithelial cell
7
right lobe of liver
7
stomach smooth muscle
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Brodmann (1909) area 46
6
CD1c-positive myeloid dendritic cell
6
CD4-positive helper T cell
6
CMK
6
Caco-2 cell
6
GM06990
6
GM08714
6
GM10266
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
annotation_type!
histone modifications
month_released!
January, 2022
August, 2021
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP