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Schema
Citing CMDGA
Clear Filters
Annotation type
12
candidate regulatory elements
7
chromatin state
6
target gene predictions
2
accessible chromatin
2
binding sites
1
variant allelic effects
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
6
bed bed9
2
bigBed bed9
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
6
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
5
endothelial cell of umbilical vein
4
aorta
3
ascending aorta
3
coronary artery
3
thoracic aorta
3
tibial artery
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
lung microvascular endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the brain vasculature
Organ
7
blood vessel
7
epithelium
7
vasculature
5
vein
2
skin of body
Life stage
3
newborn
1
adult
Date released
4
September, 2022
2
January, 2020
1
August, 2017
Software used
7
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
annotation_type!
histone modifications
Showing 7 of 7 results
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FileSet
DSR660JUZ
released
Annotation file set
: Chromatin states for BSS00298 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR550HDB
released
Annotation file set
: Chromatin states for BSS00296 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR734HYX
released
Annotation file set
: Chromatin states for BSS00260 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR847QEV
released
Annotation file set
: Chromatin states for BSS00258 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP