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Citing CMDGA
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Annotation type
3
chromatin state
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
2
RNA-seq
Available data
bed bed3+
16
bigWig
3
bed bed9
2
tsv
File set status
5
released
Genome assembly (visualization)
4
GRCh38
3
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
5
retina
2
eye
1
WERI-Rb-1
1
fibroblast of the conjunctiva
1
iris pigment epithelial cell
1
retinal pigment epithelial cell
Organ
5
eye
Life stage
3
embryonic
2
adult
Date released
3
September, 2022
2
February, 2020
Software used
3
chromhmm
1
qTLtools
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
meQTL
files.file_type!
bed bed3+
Showing 5 of 5 results
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FileSet
DSR764IKI
released
Annotation file set
: Chromatin states for BSS01504 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR034BAL
released
Annotation file set
: Chromatin states for BSS01503 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR883QBG
released
Annotation file set
: Chromatin states for BSS01502 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010VOR
released
Annotation file set
: cis-eQTL of eye from EyeGEx
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR180OYG
released
Annotation file set
: Gene expression summary of TPM of eye from EyeGEx
Lab:
AMP-T2D consortium
Project:
AMP