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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
cell line
Biosample term
67
muscle of arm
58
muscle of leg
54
H1-hESC
54
muscle of back
23
trophoblast cell
20
psoas muscle
18
gastrocnemius medialis
17
muscle of trunk
16
H9
16
chorionic villus
16
skeletal muscle tissue
13
skeletal muscle satellite cell
11
esophagus muscularis mucosa
11
trophoblast
10
endodermal cell
9
skeletal muscle fiber
9
stomach smooth muscle
8
mesodermal cell
7
LHCN-M2
7
gastroesophageal sphincter
7
type I muscle cell
7
type II muscle cell
6
H7-hESC
6
HUES6
6
HUES8
6
skeletal muscle cell
5
A673
5
CyT49
5
H4
5
HUES64
5
SJCRH30
5
ectodermal cell
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
myotube
4
ELF-1
4
HUES48
4
UCSF-4
4
embryonic facial prominence
4
rectum smooth muscle tissue
3
ES-I3
3
cardiac mesoderm primordium
3
hESC H9
3
primordial germ cell
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
first pancreatic bud
2
forelimb muscle
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
H1
1
H7
1
aortic smooth muscle cell
1
cardiogenic mesoderm
1
embryonic fibroblast
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
rectal smooth muscle tissue
1
smooth muscle tissue
1
trophoblast giant cell
Organ
5
embryo
0
musculature of body
Life stage
4
embryonic
Date released
3
September, 2022
2
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
pQTL
Showing 5 of 5 results
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Download
FileSet
DSR271EXL
released
Annotation file set
: Candidate regulatory elements for BSS00273 ectodermal cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR203UHP
released
Annotation file set
: Target gene predictions for BSS00273 ectodermal cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR957XUP
released
Annotation file set
: Chromatin states for BSS00273 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR982BXE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE ectodermal cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR729IJS
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_ectodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP