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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
67
muscle of arm
64
HeLa-S3
58
muscle of leg
54
muscle of back
20
psoas muscle
18
gastrocnemius medialis
17
muscle of trunk
16
skeletal muscle tissue
13
skeletal muscle satellite cell
11
esophagus muscularis mucosa
9
skeletal muscle fiber
9
stomach smooth muscle
9
uterus
7
LHCN-M2
7
gastroesophageal sphincter
7
type I muscle cell
7
type II muscle cell
6
skeletal muscle cell
5
A673
5
SJCRH30
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
myotube
4
Ishikawa
4
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
endometrium cancer
2
forelimb muscle
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
2
uterine smooth muscle cell
1
aortic smooth muscle cell
1
cervix - ectocervix
1
endometrium
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
rectal smooth muscle tissue
1
smooth muscle tissue
Organ
4
uterus
0
musculature of body
Life stage
1
adult
Date released
3
February, 2021
1
June, 2020
Software used
3
macs
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
pQTL
Showing 4 of 4 results
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Download
FileSet
DSR256RVP
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Ishikawa
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR822EYN
released
Annotation file set
: Histone modifications annotation for Uterus Ishikawa from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR551XXL
released
Annotation file set
: Binding sites annotation for Uterus Ishikawa from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR250RSS
released
Annotation file set
: Accessible chromatin annotation for Uterus Ishikawa from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP