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Citing CMDGA
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Annotation type
13
accessible chromatin
7
eQTL
4
target gene predictions
3
variant allelic effects
2
gene expression
1
binding sites
1
caQTL
1
histone modifications
Annotation Category
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
2
CD4-positive helper T cell
2
endothelial cell
1
coronary artery
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
mesenchymal stem cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Date released
1
February, 2023
Software used
1
rasqual
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
representative DNase hypersensitivity sites
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FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP