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Citing CMDGA
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Annotation type
28
candidate regulatory elements
19
target gene predictions
15
chromatin state
12
binding sites
7
accessible chromatin
5
histone modifications
1
variant allelic effects
0
eQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
1
mammary gland epithelial cell
Organ
46
brain
44
epithelium
37
connective tissue
26
pancreas
21
vasculature
20
kidney
16
adipose tissue
16
heart
15
blood vessel
14
musculature of body
13
limb
12
liver
9
artery
6
intestine
5
esophagus
4
nerve
4
skin of body
3
eye
3
gonad
3
stomach
3
ureter
2
adrenal gland
2
blood
2
bodily fluid
2
large intestine
2
lung
2
prostate gland
2
spinal cord
2
testis
2
thyroid gland
1
breast
1
bronchus
1
extraembryonic component
1
mammary gland
1
mouth
1
ovary
1
pituitary gland
1
placenta
1
small intestine
1
spleen
1
uterus
1
vagina
1
vein
Date released
1
February, 2024
Software used
1
deltasvm
Lab
1
Bing Ren, UCSD
Project
1
AMP
RFA
1
AMP
annotation_type!
representative DNase hypersensitivity sites
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FileSet
DSR732VXG
released
Annotation file set
: Variant allelic effects annotation of Mammary epithelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP