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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
gene expression
Annotation Category
cis-regulatory elements
2
Target gene links
1
Gene expression levels
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
54
HeLa-S3
46
H1-hESC
30
islet of Langerhans
25
heart
23
monocyte
22
K562
21
stomach
20
brain
19
HFFc6
19
lung
18
A549
18
liver
17
adrenal gland
17
epithelial cell of proximal tubule
17
muscle of arm
17
small intestine
15
adipose tissue
15
glomerular endothelial cell
15
kidney
15
placenta
14
subcutaneous adipose tissue
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
13
thymus
12
neural progenitor cell
12
regulatory T cell
12
tibial nerve
11
B cell
11
EndoC_BH1
11
T-helper 1 cell
11
body of pancreas
11
cardiomyocytes
11
coronary artery
11
heart left ventricle
11
hematopoietic multipotent progenitor cell
11
hepatocyte
11
right atrium auricular region
11
right kidney
11
right lung
10
T-helper 17 cell
10
caudate nucleus
10
frontal cortex
10
macrophage
10
renal cortex interstitium
10
renal pelvis
10
tibial artery
9
CD4-positive, alpha-beta memory T cell
9
cerebellum
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
left kidney
9
omental fat pad
9
progenitor cell of endocrine pancreas
9
putamen
9
spleen
9
substantia nigra
8
ascending aorta
8
cardiomyocytes (cardiac muscle cell)
8
neutrophil
8
spinal cord
7
Ammon's horn
7
CD8-positive, alpha-beta memory T cell
7
GM12878
7
H9
7
T-helper 2 cell
7
endothelial cell
7
glomerular visceral epithelial cell
7
heart right ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphocyte
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
ovary
7
psoas muscle
6
T cell
6
amygdala
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
hypothalamus
6
iPSC derived cell line
6
kidney interstitial cell
6
lymphoblastoid cell line
6
mononuclear cell
6
nucleus accumbens
6
olfactory receptor cell
6
pancreas
6
retina
6
right lobe of liver
6
sigmoid colon
6
skeletal muscle tissue
5
C1 segment of cervical spinal cord
5
MCF-7
5
aorta
5
gastrocnemius medialis(Muscle - Skeletal)
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mesangial cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
natural killer cell
5
pancreatic ductal cell
5
testis
5
thyroid gland
5
transverse colon
5
trophoblast cell
4
CD14-positive monocyte
4
CyT49
4
HUES8
4
adult endothelial progenitor cell
4
bone tissue
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
esophagus
4
foreskin keratinocyte
4
gamma-delta T cell
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
nephron progenitor
4
skeletal muscle myoblast
4
skin of body
4
vagina
4
visceral abdominal adipose tissue
3
CD8-positive, alpha-beta T cell
3
HCT116
3
Peyer's patch
3
S-shaped body
3
T follicular helper cell
3
adipocyte
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
dorsolateral prefrontal cortex
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
esophagus muscularis mucosa
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
hepatic stellate cell
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
left cardiac atrium
3
left renal cortex interstitium
3
left renal pelvis
3
mammary gland epithelial cell
3
memory B cell
3
mesenchymal stem cell
3
naive B cel
3
naive T cell
3
neurosphere
3
occipital lobe
3
osteoblast
3
prostate gland
3
renal cortical epithelial cell
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
smooth muscle cell of the coronary artery
3
temporal lobe
3
thoracic aorta
3
trophoblast
3
upper lobe of left lung
3
uterus
2
cardiac fibroblast
2
muscle of leg
2
22Rv1
2
Brodmann (1909) area 46
2
CD4-positive, alpha-beta T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
HepG2
2
Kupffer cell
2
LNCaP clone FGC
2
MIN6
2
NAMALWA cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
activated CD4-positive, alpha-beta T cell
2
angular gyrus
Organ
3
connective tissue
Life stage
2
adult
1
unknown
Date released
2
September, 2022
1
February, 2021
Software used
3
r
Lab
4
Jesse Engreitz, Stanford University
3
AMP-T2D consortium
1
Bing Ren, UCSD
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
annotation_type!
sQTL
annotation_category!
cis-regulatory elements
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR339QKV
released
Annotation file set
: Target gene predictions for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619LYX
released
Annotation file set
: Target gene predictions for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR356IFR
released
Annotation file set
: Gene expression annotation of adipocyte from abdominal and gluteo-femoral preadipocytes of GSE118500 for GSE118497
Lab:
AMP-T2D consortium
Project:
AMP