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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
3
target gene predictions
Annotation Category
3
Target gene links
3
cis-regulatory elements
Annotation type Category
3
ATAC-seq
3
Capture-C
Available data
3
bed bed3+
File set status
6
released
Genome assembly (visualization)
3
hg19
Organism
6
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
stem cell
Biosample term
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
undifferentiated ESC (H9 cell line)
Organ
3
brain
connective tissue
Date released
3
November, 2022
3
September, 2023
Software used
3
chicago
3
macs
Lab
6457
AMP-T2D consortium
334
Bing Ren, UCSD
266
KPMP
132
Kyle Gaulton, UCSD
126
Jesse Engreitz, Stanford University
53
Stephen Parker, UMich
52
Katalin Susztak, Upenn
24
Ines Cebola, Imperial College London
16
Xin Sun, UCSD
9
Anna Gloyn, Oxford
6
Struan F.A. Grant, CHOP
5
Patrick T. Ellinor, Broad
3
Stephen S. Rich Lab @UVA
2
Karen Mohlke, UNC
1
ITG
Project
6
AMP
RFA
6
AMP2
annotation_type!
sQTL
organ_slims!
connective tissue
Showing 6 of 6 results
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Download
FileSet
DSR383OMT
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Progenitor (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR416XCR
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Neuron (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR593BUS
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Neuron).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR817DDX
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Progenitor).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP