Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
variant allelic effects
1
chromatin state
Annotation Category
4
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
DNase-seq
1
ChIP-seq
Available data
4
bed bed3+
1
bed bed9
1
bigBed bed9
File set status
4
released
1
revoked
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
2
heart
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney
Organ
2
heart
1
epithelium
1
kidney
1
liver
Life stage
22
adult
7
embryonic
5
fetal
2
newborn
1
unknown
Date released
21
February, 2021
19
January, 2020
15
February, 2020
5
May, 2020
3
November, 2021
1
March, 2020
1
November, 2019
Software used
4
deltasvm
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
sQTL
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR438ODC
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver fetal ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR298BMZ
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart fetal ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR821RRV
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney fetal DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480PRT
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart child DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR032VAF
revoked
Annotation file set
: ChromHMM 5-state model for heart fetal from 5 GSE63634 ChIP-seq data (very large promoter regions, revoked)
Lab:
AMP-T2D consortium
Project:
AMP