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Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
target gene predictions
3
candidate regulatory elements
2
chromatin state
1
binding sites
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
6
fibroblast
3
enterocyte
3
macrophage
3
myofibroblast cell
2
MIN6
2
Schwann cell
2
T cell
2
basal cell
2
endothelial cell
2
epithelial cell of esophagus
2
goblet cell
2
skeletal muscle fiber
2
smooth muscle cell
2
vascular associated smooth muscle cell
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
bronchial goblet cell
1
cardiac muscle cell
1
cortical cell of adrenal gland
1
granulosa cell
1
hepatocyte
1
keratinocyte
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
naive t cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
purified protein and synthetic DNA oligo binding assay
1
thyroid follicular cell
1
type II pneumocyte
Organ
1
epithelium
1
liver
Date released
1
February, 2024
May, 2020
Software used
1
deltasvm
Lab
1
Bing Ren, UCSD
Project
1
AMP
RFA
1
AMP
annotation_type!
target gene predictions
month_released!
May, 2020
August, 2020
Showing 1 of 1 results
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Download
FileSet
DSR179RJC
released
Annotation file set
: Variant allelic effects annotation of Hepatocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP