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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
chromatin state
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
2
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
12
prostate gland
9
epithelial cell of prostate
8
22Rv1
6
PC-3
6
RWPE1
5
LNCAP
5
LNCaP clone FGC
3
C4-2B
3
RWPE2
3
VCaP cell
1
VCaP
1
luminal epithelial cell of prostatic duct
1
prostate
Disease term
4
prostate adenocarcinoma
Organ
5
prostate gland
Life stage
5
adult
Date released
4
September, 2022
1
February, 2021
Software used
2
chromhmm
2
r
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
target gene predictions
Showing 5 of 5 results
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Download
FileSet
DSR603DZA
released
Annotation file set
: Candidate regulatory elements for BSS01174 LNCaP clone FGC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR829EAT
released
Annotation file set
: Candidate regulatory elements for BSS01173 LNCaP clone FGC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR439HDF
released
Annotation file set
: Chromatin states for BSS01174 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR153AHO
released
Annotation file set
: Chromatin states for BSS01173 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR328SIT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LNCaP clone FGC
Lab:
AMP-T2D consortium
Project:
AMP