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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
27
adipose tissue
26
adipocyte
24
fibroblast
22
pericyte cell
19
foreskin fibroblast
18
mesenchymal stem cell
17
fibroblast of cardiac tissue
17
osteoblast
16
fibroblast of lung
16
omental fat pad
14
subcutaneous adipose tissue
12
fibroblast of dermis
12
skin fibroblast
10
hepatic stellate cell
10
pancreatic stellate cell
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
GM23248
7
chondrocyte
7
mesangial cell
6
subcutaneous abdominal adipose tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
cardiac fibroblast
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
4
HT1080
4
adult endothelial progenitor cell
4
bone tissue
4
fibroblast of gingiva
4
preadipocyte
4
stromal cell of bone marrow
3
cardiac fibroblast
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
brain pericyte
3
cartilage tissue
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
3
visceral abdominal adipose tissue
2
adipose tissue derived mesenchymal stem cell
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
luteal cell
2
stromal cell
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fat cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
Disease term
3
fibrosarcoma
Organ
4
connective tissue
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
variant allelic effects
eQTL
Showing 4 of 4 results
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Download
FileSet
DSR838AAN
released
Annotation file set
: Candidate regulatory elements for BSS00709 HT1080 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810CKU
released
Annotation file set
: Target gene predictions for BSS00709 HT1080 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488OIF
released
Annotation file set
: Chromatin states for BSS00709 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR542MAT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HT1080
Lab:
AMP-T2D consortium
Project:
AMP