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Citing CMDGA
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Annotation type
5
candidate regulatory elements
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
5
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
129
monocyte
55
HeLa-S3
51
H1-hESC
47
CD8-positive, alpha-beta T cell
42
islet of Langerhans
39
neural progenitor cell
38
kidney
31
heart
30
retina
29
stomach
27
hepatocyte
27
liver
24
brain
23
K562
21
endothelial cell
20
EndoC_BH1
20
adrenal gland
20
breast cancer cell
20
lung
20
pigmented layer of retina
20
subcutaneous adipose tissue
19
CD14-positive monocyte
19
HFFc6
19
epithelial cell of proximal tubule
19
muscle of leg
19
pancreatic ductal cell
18
embryonic stem cell
18
muscle of arm
18
placenta
18
small intestine
17
adipocyte
17
glomerular endothelial cell
17
large intestine
16
B cell
16
heart left ventricle
16
macrophage
16
regulatory T cell
16
spleen
15
common myeloid progenitor, CD34-positive
15
muscle of back
14
T-helper 1 cell
14
endothelial cell of hepatic sinusoid
14
pancreas
14
spinal cord
14
thymus
14
tibial nerve
13
CD4-positive, alpha-beta T cell
13
GM12878
13
H9
13
hematopoietic multipotent progenitor cell
13
left lung
13
osteoblast
12
cardiac muscle cell
12
caudate nucleus
12
coronary artery
12
endothelial cell of umbilical vein
12
foreskin fibroblast
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
renal pelvis
12
retinal pigment epithelial cell
12
right lung
12
substantia nigra
11
MCF-7
11
T-helper 17 cell
11
adipose tissue
11
mesenchymal stem cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
natural killer cell
11
omental fat pad
11
renal cortex interstitium
10
HepG2
10
Rhabdomyosarcoma
10
body of pancreas
10
gastric cancer cell
10
neuronal stem cell
10
pancreatic beta cell
10
progenitor cell of endocrine pancreas
10
putamen
9
Ammon's horn
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
frontal cortex
9
induced pluripotent stem cell
9
liposarcoma
9
ovary
9
pancreatic acinar cell
9
right atrium auricular region
9
right kidney
9
skeletal muscle myoblast
9
testis
9
tibial artery
8
A549
8
B-lymphoblastoid cell line
8
fibroblast cell line
8
foreskin keratinocyte
8
glomerular visceral epithelial cell
8
heart right ventricle
8
keratinocyte
8
neutrophil
8
pituitary stalk
7
Jurkat
7
amygdala
7
cerebellum
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
left cardiac atrium
7
mature neutrophil
7
pancreatic alpha cell
7
pancreatic stellate cell
7
temporal lobe
6
Chondroid Chordoma
6
HEK293
6
HUES8
6
IMR-90
6
LNCAP
6
Rh-4 cell
6
anterior cingulate cortex
6
aorta
6
ascending aorta
6
bronchial epithelial cell
6
cardiomyocytes (cardiac muscle cell)
6
chondrocyte
6
fibroblast
6
fibroblast of lung
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
left kidney
6
lymphocyte
6
neuroblastoma cell line
6
nucleus accumbens
6
sigmoid colon
6
skeletal muscle satellite cell
6
smooth muscle cell
6
smooth muscle cell of the coronary artery
6
trophoblast cell
6
upper lobe of left lung
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive, alpha-beta memory T cell
5
CyT49
5
Ewing sarcoma
5
GM06990
5
GM12864
5
GM12865
5
GM19240
5
HAP-1
5
HCT-116 cell
5
HL-60
5
HT-29
5
KARPAS-422 cell
5
MM.1S
5
PC-9
5
Peyer's patch
5
SGBS preadipocytes
5
SK-N-MC
5
T-helper 2 cell
5
acute myeloid leukemia
5
cardiac precursors (cardiac muscle cell)
5
kidney interstitial cell
5
kidney loop of Henle thin ascending limb epithelial cell
5
mesendoderm
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
osteosarcoma
5
prostate cancer cell line
5
prostate gland
5
right lobe of liver
5
transverse colon
5
type I muscle cell
4
22Rv1
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
BE(2)-C
4
BJ cell
4
CD1c-positive myeloid dendritic cell
4
CD4-positive helper T cell
4
CMK
4
COLO205
4
Caco-2 cell
4
GM12873
4
GM12875
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
GM23248
4
HAC cell
4
HBMEC cell
4
HS-SY-2 cell
4
Ishikawa
4
LHCN-M2
4
LoVo cell
4
MDA-MB-231 cell
Life stage
5
unknown
Date released
September, 2022
5
February, 2021
Software used
5
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
variant allelic effects
month_released!
September, 2022
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR754EKH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE CD4-positive, alpha-beta memory T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR680NYQ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE CD4-positive, alpha-beta memory T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR109IXL
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE CD4-positive, alpha-beta memory T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR509RDB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE CD4-positive, alpha-beta memory T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR025GSC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE CD4-positive, alpha-beta memory T cell
Lab:
AMP-T2D consortium
Project:
AMP