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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
target gene predictions
variant allelic effects
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
snATAC-seq
Available data
9
bed bed3+
5
bigWig
5
tsv
2
bigBed narrowPeak
1
bam
1
bed gappedPeak
1
xls
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
Organ
2
epithelium
2
pancreas
Life stage
2
adult
Date released
1
February, 2024
1
September, 2022
Software used
1
cicero
1
macs
Lab
2
Kyle Gaulton, UCSD
Project
2
AMP
RFA
2
AMP
annotation_type!
variant allelic effects
Showing 2 of 2 results
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FileSet
DSR236XNZ
released
Annotation file set
: pancreatic delta cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR119NFC
released
Annotation file set
: pancreatic delta cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP