Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
131
monocyte
88
heart
86
stomach
80
kidney
72
brain
68
lung
66
muscle of arm
64
HeLa-S3
62
A549
62
adrenal gland
60
placenta
58
muscle of leg
54
H1-hESC
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
51
CD8-positive, alpha-beta T cell
51
neural progenitor cell
49
liver
48
thymus
45
right lung
44
B cell
44
islet of Langerhans
43
hematopoietic multipotent progenitor cell
41
K562
41
right kidney
39
endothelial cell
39
renal cortex interstitium
39
renal pelvis
39
retina
36
left kidney
35
hepatocyte
35
spinal cord
34
spleen
32
CD4-positive, alpha-beta memory T cell
32
heart left ventricle
31
CD14-positive monocyte
30
adipose tissue
29
macrophage
28
regulatory T cell
26
MCF-7
25
fibroblast
24
adipocyte
24
pancreatic ductal cell
23
T-helper 1 cell
23
body of pancreas
23
natural killer cell
23
smooth muscle cell
23
tibial nerve
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
EndoC_BH1
22
epithelial cell of proximal tubule
22
foreskin keratinocyte
22
pericyte cell
21
T-helper 17 cell
21
caudate nucleus
20
T cell
20
breast cancer cell
20
glomerular endothelial cell
20
keratinocyte
20
mononuclear cell
20
ovary
20
pancreas
20
pigmented layer of retina
20
psoas muscle
20
subcutaneous adipose tissue
19
foreskin fibroblast
19
mesenchymal stem cell
18
HFFc6
18
coronary artery
18
embryonic stem cell
18
endothelial cell of umbilical vein
18
gastrocnemius medialis
18
heart right ventricle
18
substantia nigra
18
thyroid gland
17
HepG2
17
T-helper 2 cell
17
astrocyte
17
muscle of trunk
17
omental fat pad
17
osteoblast
17
pancreatic beta cell
17
right atrium auricular region
17
testis
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
induced pluripotent stem cell
16
layer of hippocampus
16
pancreatic acinar cell
16
pancreatic alpha cell
16
retinal pigment epithelial cell
16
skeletal muscle tissue
16
tibial artery
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
GM12878
15
cardiac muscle cell
15
cerebellum
15
neutrophil
15
skeletal muscle myoblast
14
H9
14
ascending aorta
14
endocrine pancreas
14
frontal cortex
14
mammary gland epithelial cell
14
pancreatic delta cell
14
prostate gland
13
aorta
13
bronchial epithelial cell
13
excitatory neuron
13
neurosphere
13
putamen
13
skeletal muscle satellite cell
13
temporal lobe
12
Ammon's horn
12
fibroblast of dermis
12
lymphoblastoid cell line
12
mammary epithelial cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuroblastoma cell
11
breast epithelium
11
epithelial cell of prostate
11
erythroblast
11
glomerular visceral epithelial cell
11
left renal cortex interstitium
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
kidney tubule cell
10
left cardiac atrium
10
lymphocyte
10
neuronal stem cell
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal pelvis
10
skin fibroblast
10
trophoblast
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
choroid plexus epithelial cell
9
diffuse intrinsic pontine glioma
9
esophagus
9
hepatic stellate cell
9
left renal pelvis
9
liposarcoma
9
parathyroid adenoma
9
right renal cortex interstitium
9
thoracic aorta
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM12865
8
HEK293
8
IMR-90
8
NAMALWA cell
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BJ cell
7
GM06990
7
GM12864
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
mature neutrophil
7
memory B cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
BE(2)-C
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
annotation_type!
variant allelic effects
organ_slims!
intestine
bone marrow
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP