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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
4
chromatin state
3
target gene predictions
1
binding sites
1
eQTL
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
18
brain
5
temporal lobe
4
angular gyrus
4
caudate nucleus
4
layer of hippocampus
3
cingulate gyrus
3
substantia nigra
2
Brodmann (1909) area 46
2
SK-N-DZ
2
SK-N-SH
2
cerebellum
2
frontal cortex
1
A172
1
Ammon's horn
BE(2)-C
1
Daoy
1
H54
1
M059J
1
SK-N-MC
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
pons
1
putamen
Organ
4
brain
Life stage
3
adult
Date released
3
September, 2022
1
August, 2017
Software used
4
chromhmm
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
annotation_type!
variant allelic effects
biosample_term_name!
BE(2)-C
Showing 4 of 4 results
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Download
FileSet
DSR134KVZ
released
Annotation file set
: Chromatin states for BSS01126 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR320XYP
released
Annotation file set
: Chromatin states for BSS01125 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR457QPR
released
Annotation file set
: Chromatin states for BSS01124 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR013323
released
Annotation file set
: ChromHMM 13-state model for hippocampus middle
Lab:
Stephen Parker, UMich
Project:
AMP