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Schema
Citing CMDGA
Clear Filters
Annotation type
93
candidate regulatory elements
70
target gene predictions
68
chromatin state
50
accessible chromatin
45
gene expression
20
histone modifications
18
binding sites
14
eQTL
variant allelic effects
12
Fine-mapped variants
4
differential activity
3
caQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
2
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
1
coronary artery
1
liver
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
Date released
2
February, 2023
1
May, 2022
Software used
3
rasqual
1
eigenmt
Lab
2
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
3
AMP
RFA
3
AMP
annotation_type!
variant allelic effects
Showing 3 of 3 results
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FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP