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Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
16
target gene predictions
4
accessible chromatin
3
binding sites
3
histone modifications
1
eQTL
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
DNase-seq
2
snATAC-seq
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
1
fibroblast of villous mesenchyme
1
placenta
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
Organ
154
epithelium
71
connective tissue
46
pancreas
41
brain
35
kidney
27
musculature of body
25
vasculature
21
intestine
20
heart
15
blood vessel
15
lung
13
limb
13
skin of body
12
blood
12
bodily fluid
12
embryo
12
eye
11
liver
10
large intestine
9
extraembryonic component
8
bone element
8
lymph node
8
stomach
7
adrenal gland
7
mammary gland
5
artery
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
adipose tissue
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
skeleton
1
spleen
1
tongue
1
trachea
1
urinary bladder
Date released
2
June, 2020
2
November, 2021
Software used
4
macs
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
annotation_type_category!
ATAC-seq
Showing 4 of 4 results
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Download
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR100TUS
released
Annotation file set
: Accessible chromatin annotation of Fetal Placental Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR953MXQ
released
Annotation file set
: Accessible chromatin annotation for Placenta Placenta from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR263KFM
released
Annotation file set
: Accessible chromatin annotation for Placenta HVMF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP