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Schema
Citing CMDGA
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Annotation type
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
7
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
5
islet of Langerhans
5
pancreatic acinar cell
5
pancreatic ductal cell
4
pancreatic beta cell
3
pancreas
3
pancreatic alpha cell
2
pancreatic stellate cell
1
EndoC_BH1
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic delta cell
1
type B pancreatic cell
Organ
3
epithelium
3
pancreas
Life stage
1
adult
Date released
2
November, 2021
1
October, 2019
Software used
3
macs
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
Showing 3 of 3 results
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Download
FileSet
DSR853JCR
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Alpha Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR959HLG
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Alpha Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR110ITH
released
Annotation file set
: Pancreatic alpha cell accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP