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Schema
Citing CMDGA
Clear Filters
Annotation type
58
target gene predictions
9
candidate regulatory elements
4
binding sites
4
chromatin state
3
accessible chromatin
2
gene expression
2
histone modifications
1
eQTL
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
2
DNase-seq
1
RNA-seq
1
snATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
2
uterus
1
Ishikawa
1
uterine smooth muscle cell
Organ
215
epithelium
109
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
32
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
skin of body
15
bone element
15
lung
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Date released
2
June, 2020
1
January, 2022
1
November, 2021
Software used
3
macs
1
qTLtools
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
biosample_term_name!
IMR-90
Showing 4 of 4 results
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FileSet
DSR572QKZ
released
Annotation file set
: uterus eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR680BYM
released
Annotation file set
: Accessible chromatin annotation of Smooth Muscle (Uterine) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR373YCF
released
Annotation file set
: Accessible chromatin annotation for Uterus Uterus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR250RSS
released
Annotation file set
: Accessible chromatin annotation for Uterus Ishikawa from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP