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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
DNase-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
cell line
1
primary cell
Biosample term
23
retina
20
pigmented layer of retina
18
monocyte
16
fibroblast
15
endothelial cell
13
macrophage
12
excitatory neuron
10
kidney
10
neural progenitor cell
10
pericyte cell
9
retinal pigment epithelial cell
8
B cell
8
EndoC_BH1
8
astrocyte
8
hepatocyte
8
pancreatic ductal cell
8
smooth muscle cell
7
T cell
7
islet of Langerhans
7
pancreatic acinar cell
7
pancreatic beta cell
6
SGBS preadipocytes
6
adipocyte
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
pancreatic alpha cell
5
CD8-positive, alpha-beta T cell
5
chondrocyte
5
erythroblast
5
heart
5
inhibitory neuron
5
pancreas
5
regulatory T cell
5
skeletal muscle fiber
4
fibroblast of cardiac tissue
4
liver
4
memory B cell
4
natural killer cell
4
pancreatic delta cell
4
pancreatic stellate cell
4
skeletal muscle satellite cell
4
type II pneumocyte
3
T-helper 1 cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
glomerular visceral epithelial cell
3
heart left ventricle
3
hepatic stellate cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
osteoblast
3
right atrium auricular region
3
skin fibroblast
3
stomach
3
tibial artery
3
tibial nerve
3
type I pneumocyte
2
cardiac fibroblast
2
Ammon's horn
2
CD4-positive helper T cell
2
HepG2
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rh-4 cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle cell
2
caudate nucleus
2
central memory CD8-positive, alpha-beta T cell
2
choroid plexus epithelial cell
2
ciliated cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
frontal cortex
2
gamma-delta T cell
2
glial cell
2
globus pallidus
2
glomerular endothelial cell
2
keratinocyte
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mature natural killer cell
2
medulla oblongata
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
2
mesothelial cell
2
midbrain
2
muscle of leg
2
naive regulatory T cell
2
neuron
2
occipital lobe
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
omental fat pad
2
pancreatic polypeptide-secreting cell
2
plasma cell
2
plasmacytoid dendritic cell
2
pons
2
putamen
2
renal cortical epithelial cell
2
renal pelvis
2
schwann cell
2
skeletal muscle myoblast
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
subcutaneous adipose tissue
2
superior temporal gyrus
2
type I muscle cell
2
type II muscle cell
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H1-hESC
1
H4
1
H7-hESC
1
HAC cell
1
HAP-1
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HGF
1
HL-60
1
HT-29
1
HUES6
1
HUES8
1
HeLa cell
Organ
2
brain
2
connective tissue
Date released
1
January, 2020
1
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
glomerular visceral epithelial cell
relevant_life_stage!
unknown
Showing 2 of 2 results
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Download
FileSet
DSR229BKS
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HBVP from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585ZLG
released
Annotation file set
: Accessible chromatin annotation of brain pericyte from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP