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Schema
Citing CMDGA
Clear Filters
Annotation type
37
candidate regulatory elements
23
target gene predictions
20
chromatin state
3
accessible chromatin
1
eQTL
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
2
small intestine
1
enterocyte of epithelium of small intestine
1
small intestine goblet cell
Organ
213
epithelium
109
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
32
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Date released
2
November, 2021
1
January, 2022
1
June, 2020
Software used
3
macs
1
qTLtools
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
biosample_term_name!
mesothelial cell
Showing 4 of 4 results
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Download
FileSet
DSR654RQI
released
Annotation file set
: small intestine eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR459YTN
released
Annotation file set
: Accessible chromatin annotation of Small Intestinal Goblet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR273VIV
released
Annotation file set
: Accessible chromatin annotation of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR074FIF
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Intestine, Small from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP