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Citing CMDGA
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Annotation type
834
target gene predictions
833
chromatin state
832
candidate regulatory elements
6
histone modifications
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ATAC-seq
Available data
6
bed bed3+
bam
3
bed gappedPeak
3
bigWig
3
xls
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
2
aortic endothelial cell
1
islet of Langerhans
Organ
2
artery
2
blood vessel
2
epithelium
2
vasculature
1
pancreas
Life stage
2
unknown
1
adult
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
4
January, 2022
3
September, 2018
3
September, 2022
2
November, 2020
1
June, 2021
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
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bam
Showing 3 of 3 results
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FileSet
DSR704VCJ
released
Annotation file set
: Accessible chromatin of human aortic endothelial cells (HAEC) in response to shear stress forces disturbed flow(DF) using ATAC-Seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR463OXW
released
Annotation file set
: Accessible chromatin of human aortic endothelial cells (HAEC) in response to shear stress forces unidirectional flow(UF) using ATAC-Seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR507522
released
Annotation file set
: Merged ATAC-seq sites in islets for 23 samples including 4 from Bing Ren at UCSD, 2 from Stephen Parker at UMich, and 17 from Mark McCarthy at Oxford (HP1507 and HP1507UW)
Lab:
AMP-T2D consortium
Project:
AMP