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Schema
Citing CMDGA
Clear Filters
Annotation type
17
candidate regulatory elements
11
target gene predictions
8
chromatin state
4
accessible chromatin
3
binding sites
3
eQTL
2
gene expression
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
DNase-seq
Available data
5
bed bed3+
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
tissue
1
cell line
1
primary cell
Biosample term
1
NT2-D1 cell
1
ovary
1
somatic gonadal cell
1
testis
Organ
52
epithelium
33
connective tissue
23
eye
21
brain
15
kidney
15
pancreas
12
blood
12
bodily fluid
11
musculature of body
10
embryo
10
intestine
10
liver
10
vasculature
8
blood vessel
8
lymph node
8
skin of body
7
large intestine
6
extraembryonic component
6
limb
6
lung
5
bone element
5
heart
5
prostate gland
4
gonad
4
mammary gland
3
artery
3
penis
3
stomach
2
adipose tissue
2
esophagus
2
placenta
2
spinal cord
2
testis
2
uterus
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
lymphoid tissue
1
mouth
1
nerve
1
nose
1
ovary
1
small intestine
1
spleen
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
ureter
1
urinary bladder
1
vein
Date released
4
June, 2020
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
files.file_type!
bigWig
biosample_term_name!
GM18507
Showing 4 of 4 results
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Download
FileSet
DSR815ZSB
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell NT2-D1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR924JBA
released
Annotation file set
: Accessible chromatin annotation for Gonad Testis from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR007KDG
released
Annotation file set
: Accessible chromatin annotation for Gonad Ovary from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR547ORX
released
Annotation file set
: Accessible chromatin annotation for Gonad Gonad somatic cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP