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Schema
Citing CMDGA
Clear Filters
Annotation type
115
differential activity
7
accessible chromatin
1
variant allelic effects
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ATAC-seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
6
cell line
1
primary cell
Biosample term
6
EndoC_BH1
1
CD4-positive helper T cell
Organ
6
epithelium
6
pancreas
Date released
6
May, 2021
1
February, 2024
Software used
836
macs
6
deseq2
6
samtools
1
bedops
1
pepatac
Lab
6
AMP-T2D consortium
1
Stephen S. Rich Lab @UVA
Project
6
AMP
1
T1D
RFA
6
AMP
1
T1D
organ_slims!
uterus
Showing 7 of 7 results
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FileSet
DSR204EGG
released
Annotation file set
: A canonical set of CD4+ T cell peaks
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR313PSZ
released
Annotation file set
: IFNα induces early changes in chromatin accessibility of GSE133219, stable open chromatin regions detected at 2 h(fast response)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR521RFR
released
Annotation file set
: IFNα induces early changes in chromatin accessibility of GSE133219, loss open chromatin regions detected at 2 h(fast response)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR062QKS
released
Annotation file set
: IFNα induces early changes in chromatin accessibility of GSE133219, gained open chromatin regions detected at 2 h(fast response)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR955RJH
released
Annotation file set
: IFNα induces early changes in chromatin accessibility of GSE133219, stable open chromatin regions detected at 24 h(late response)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195HKC
released
Annotation file set
: IFNα induces early changes in chromatin accessibility of GSE133219, loss open chromatin regions detected at 24 h(late response)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR460ECL
released
Annotation file set
: IFNα induces early changes in chromatin accessibility of GSE133219, gained open chromatin regions detected at 24 h(late response)
Lab:
AMP-T2D consortium
Project:
AMP