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Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
10
endothelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
enterocyte
3
pancreatic acinar cell
3
type II pneumocyte
2
endocardial cell
2
endothelial cell of hepatic sinusoid
2
endothelial cell of lymphatic vessel
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
mesothelial cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic ductal cell
2
type I pneumocyte
1
basal cell of epidermis
1
cardiac endothelial cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
club cell
1
eccrine cell
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
foveolar cell of stomach
1
gastric goblet cell
1
goblet cell
1
granular cell of epidermis
1
hepatocyte
1
lung neuroendocrine cell
1
mammary gland epithelial cell
1
myoepithelial cell
1
non keratinizing barrier epithelial cell
1
pancreatic delta cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
placental villus capillary endothelial cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
ureteric bud
Organ
1
epithelium
Date released
1
November, 2021
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
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Download
FileSet
DSR858VQN
released
Annotation file set
: Accessible chromatin annotation of Airway Goblet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE