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Schema
Citing CMDGA
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Annotation type
5
binding sites
5
candidate regulatory elements
5
target gene predictions
3
accessible chromatin
3
chromatin state
3
histone modifications
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Biosample term
3
skin fibroblast
2
keratinocyte
1
GM23248
1
RPMI7951
1
basal cell of epidermis
1
dermis microvascular lymphatic vessel endothelial cell
1
foreskin fibroblast
1
foreskin keratinocyte
1
granular cell of epidermis
1
iPS DF 4.7 Cell Line
Organ
3
epithelium
3
skin of body
1
lymphatic vessel
1
vasculature
Date released
2
November, 2021
1
June, 2020
Software used
3
macs
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
Showing 3 of 3 results
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Download
FileSet
DSR919NQU
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR774OBV
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR841NUD
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP