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Annotation type
6
accessible chromatin
6
chromatin state
6
target gene predictions
2
candidate regulatory elements
1
gene expression
1
variant allelic effects
0
binding sites
Annotation Category
1
Gene expression levels
Annotation type Category
1
snRNA-seq
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
15
monocyte
10
endothelial cell of hepatic sinusoid
10
hepatocyte
9
H1-hESC
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
8
EndoC_BH1
7
T-helper 1 cell
7
T-helper 17 cell
7
neural progenitor cell
7
regulatory T cell
6
endothelial cell
6
islet of Langerhans
6
pancreatic ductal cell
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
T-helper 2 cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
epithelial cell of proximal tubule
3
hepatocyte(AFP)
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
B cell
2
HepG2
2
T follicular helper cell
2
body of pancreas
2
cardiac fibroblast
2
cardiomyocytes (cardiac muscle cell)
2
cerebellum
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
erythroblast
2
fibroblast of lung
2
foreskin fibroblast
2
frontal cortex
2
gamma-delta T cell
2
glomerular endothelial cell
2
heart
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
omental fat pad
2
osteoblast
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
smooth muscle cell
2
subcutaneous adipose tissue
2
tibial nerve
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
Ammon's horn
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
BE(2)-C
1
BJ cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Caco-2 cell
1
DND-41 cell
1
ECC-1
1
GM06990
1
GM08714
1
GM10847
1
GM12801
1
GM12864
1
GM12865
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM15510
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HEK293-T-REx cell
1
HFF-Myc
1
HGPS cell
1
HL-60
1
HeLa-S3
1
IMR-90
1
K562
1
MCF-7
1
MCF10A-Er-Src cell
1
NB4
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
PANC-1 cell
1
PFSK-1 cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SK-N-MC
1
SK-N-SH
1
SK-N-SH_RA
1
Schwann cell
1
T-47D cell
1
U-87 MG
1
U2OS
1
WERI-Rb-1
1
WI-38 cell
1
activated pancreatic stellate cell
1
adipocyte
1
adrenal gland
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
aorta
1
aortic adventitial fibroblast
1
aortic valve
1
astrocyte
1
bladder
1
brain
Organ
1
connective tissue
Date released
February, 2021
1
February, 2024
Software used
1
deeptools
1
r
1
samtools
1
umitools
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP2
month_released!
February, 2021
Showing 1 of 1 results
table-tab-icon
matrix-icon
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP