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Schema
Citing CMDGA
Clear Filters
Annotation type
1355
target gene predictions
902
accessible chromatin
834
candidate regulatory elements
506
gene expression
167
differential activity
166
eQTL
139
variant allelic effects
137
histone modifications
74
Fine-mapped variants
13
caQTL
8
binding sites
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
Annotation Category
8
cis-regulatory elements
Annotation type Category
8
ChIP-seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
7
hg19
6
GRCh38
1
hg18
Organism
8
Homo sapiens
Biosample type
6
primary cell
1
cell line
1
tissue
Biosample term
6
endothelial cell of hepatic sinusoid
1
HepG2
1
islet of Langerhans
Organ
7
liver
6
blood vessel
6
epithelium
6
vasculature
1
pancreas
Life stage
6
adult
Date released
February, 2021
6
February, 2024
1
August, 2021
1
March, 2020
Software used
chromhmm
6
macs
1
cisgenome
1
e-range
1
spp
Lab
6
Ines Cebola, Imperial College London
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
8
AMP
RFA
6
AMP2
2
AMP
software_used.software.name!
chromhmm
month_released!
February, 2021
Showing 8 of 8 results
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FileSet
DSR366OIY
released
Annotation file set
: Binding sites of ChREBP, TF for liver lipogenesis, in HepG2 cells(PMID:21811631)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR226RVJ
released
Annotation file set
: Binding sites of k4me3 liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR464VUR
released
Annotation file set
: Binding sites of k27ac liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR022PEY
released
Annotation file set
: Binding sites of k4me3 liver sinusoidal endothelial cells cultured with 10nM insulin and 320µM palmitic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR166SVY
released
Annotation file set
: Binding sites of k27ac liver sinusoidal endothelial cells cultured with 10nM insulin and 320µM palmitic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR469PPM
released
Annotation file set
: Binding sites of k4me3 liver sinusoidal endothelial cells cultured with 10nM insulin.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR056TZX
released
Annotation file set
: Binding sites of k27ac liver sinusoidal endothelial cells cultured with 10nM insulin.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
TSTSR883333
released
Annotation file set
: Islet TF binding sites (PDX, MAFB, NKX2.2, NKX6.1, FOXA2)
Lab:
Kyle Gaulton, UCSD
Project:
AMP